Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis

Sawabe, Tomoo; Kita-Tsukamoto, Kumiko; Thompson, Fabiano L.

Journal of Bacteriology, 2007, 189(21), 7932-7936

Permalink : https://hdl.handle.net/2115/30288

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アクセス権
open access
URI
https://hdl.handle.net/2115/30288
タイトル
Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis
著者
Sawabe, Tomoo ; Kita-Tsukamoto, Kumiko ; Thompson, Fabiano L.
e-Rad_Researcher
30241376
著者名
Sawabe, Tomoo
著者名
Kita-Tsukamoto, Kumiko
著者名
Thompson, Fabiano L.
言語
英語
発行日
2007-11
出版者
American Society for Microbiology
収録物名
Journal of Bacteriology
巻(号)
189(21)
ページ
7932-7936
抄録
We performed the first broad study aiming at the reconstruction of the evolutionary history of vibrios by means of multilocus sequence analysis of nine genes. Overall, 14 distinct clades were recognized using the SplitsTree decomposition method. Some of these clades may correspond to families, e.g., the clades Salinivibrio and Photobacteria, while other clades, e.g., Splendidus and Harveyi, correspond to genera. The common ancestor of all vibrios was estimated to have been present 600 million years ago. We can define species of vibrios as groups of strains that share >95% gene sequence similarity and >99.4% amino acid identity based on the eight protein-coding housekeeping genes. The gene sequence data were used to refine the standard online electronic taxonomic scheme for vibrios (http://www.taxvibrio.lncc.br).
資源タイプ
学術雑誌論文
出版タイプ
Version of Record
権利情報
Copyright © American Society for Microbiology
PISSN
0021-9193
関連情報
PMID
17704223
関連情報 (isIdenticalTo)
出版社版DOI
https://doi.org/10.1128/JB.00693-07