Current trends in RNA virus detection through metatranscriptome sequencing data

Nakagawa, So; Sakaguchi, Shoichi; Ogura, Atsushi et al.

FEBS Open Bio, 2023, 13(6), 992-1000

Permalink : https://hdl.handle.net/2115/96094

このアイテムのアクセス数:79件（2026-07-14 19:27 集計）

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アクセス権
open access
URI
https://hdl.handle.net/2115/96094
タイトル
Current trends in RNA virus detection through metatranscriptome sequencing data
著者
Nakagawa, So ; Sakaguchi, Shoichi ; Ogura, Atsushi ; Mineta, Katsuhiko ; Endo, Toshinori ; Suzuki, Yoshiyuki ; Gojobori, Takashi
著者名
Nakagawa, So
著者名
Sakaguchi, Shoichi
著者名
Ogura, Atsushi
著者名
Mineta, Katsuhiko
著者名
Endo, Toshinori
著者名
Suzuki, Yoshiyuki
著者名
Gojobori, Takashi
言語
英語
キーワード
endogenous viral elements
metatranscriptome
RNA virome
RNAdependent RNA polymerase
SARS-CoV-2
発行日
2023-05-10
出版者
John Wiley & Sons
収録物名
FEBS Open Bio
巻(号)
13(6)
ページ
992-1000
抄録
With advances in sequencing technology, metatranscriptome sequencing from a variety of environmental and biological sources has revealed the existence of various previously unknown RNA viruses. This review presents recent major RNA virome studies sampled from invertebrate and vertebrate species as well as aquatic environments. In particular, we focus on severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) and related RNA virus identification through metatranscriptome sequencing analyses. Recently developed bioinformatics software and databases for RNA virus identification are introduced. A relationship between newly identified RNA viruses and endogenous viral elements in host genomes is also discussed.
資源タイプ
学術雑誌論文
出版タイプ
Version of Record
権利情報
Creative Commons Attribution 4.0 International
PISSN
2211-5463
EISSN
2211-5463
関連情報 (isIdenticalTo)
出版社版DOI
https://doi.org/10.1002/2211-5463.13626