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Isolation and characterization of 25 polymorphic microsatellites of the large Japanese wood mouse (Apodemus speciosus)

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Title: Isolation and characterization of 25 polymorphic microsatellites of the large Japanese wood mouse (Apodemus speciosus)
Authors: Azuma, Noriko Browse this author →KAKEN DB
Okano, Tsukasa Browse this author
Tamaoki, Masanori Browse this author →KAKEN DB
Nakajima, Nobuyoshi Browse this author →KAKEN DB
Takamura, Noriko Browse this author →KAKEN DB
Yokohata, Yasushi Browse this author →KAKEN DB
Shindo, Junji Browse this author
Onuma, Manabu Browse this author
Keywords: Apodemus speciosus
Wood mouse
Microsatellite
NGS
Issue Date: Dec-2013
Publisher: Springer
Journal Title: Conservation genetics resources
Volume: 5
Issue: 4
Start Page: 1001
End Page: 1003
Publisher DOI: 10.1007/s12686-013-9953-1
Abstract: The large Japanese wood mouse (Apodemus speciosus) is common, but endemic to Japan, and its population structure was affected by habitat fragmentation because of urbanization. It suggested that the species might be one of the important models for the conservation of ecosystems and biodiversity affected by humans, including the effect of radioactive discharge caused by nuclear power plant accidents at Fukushima. We developed and characterized 25 novel polymorphic microsatellite markers from the next-generation sequencing data in an effort to provide an effective tool for genetic studies on this species. In 8 individuals from Aomori, Japan, the number of alleles and expected heterozygosities ranged from 5 to 13 and from 0.795 to 0.991, respectively, suggesting the availability of these markers for genetic studies in this species.
Type: article
URI: http://hdl.handle.net/2115/54020
Appears in Collections:水産科学院・水産科学研究院 (Graduate School of Fisheries Sciences / Faculty of Fisheries Sciences) > 雑誌発表論文等 (Peer-reviewed Journal Articles, etc)

Submitter: 東 典子

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