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Hokkaido University Collection of Scholarly and Academic Papers >
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Vibrio aphrogenes sp nov., in the Rumoiensis Glade isolated from a seaweed
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| Title: | Vibrio aphrogenes sp nov., in the Rumoiensis Glade isolated from a seaweed |
| Authors: | Tanaka, Mami Browse this author | | Endo, Shoko Browse this author | | Kotake, Fumihito Browse this author | | Al-Saari, Nurhidayu Browse this author | | Amin, A. K. M. Rohul Browse this author | | Feng, Gao Browse this author | | Mino, Sayaka Browse this author | | Doi, Hidetaka Browse this author | | Ogura, Yoshitoshi Browse this author | | Hayashi, Tetsuya Browse this author | | Suda, Wataru Browse this author | | Hattori, Masahira Browse this author | | Yumoto, Isao Browse this author | | Sawabe, Toko Browse this author →KAKEN DB | | Sawabe, Tomoo Browse this author →KAKEN DB | | Araki, Toshiyoshi Browse this author |
| Issue Date: | 29-Jun-2017 |
| Publisher: | PLOS |
| Journal Title: | PLoS ONE |
| Volume: | 12 |
| Issue: | 6 |
| Start Page: | e0180053 |
| Publisher DOI: | 10.1371/journal.pone.0180053 |
| Abstract: | A novel strain Vibrio aphrogenes sp. nov. strain CA-1004(T) isolated from the surface of seaweed collected on the coast of Mie Prefecture in 1994 [1] was characterized using poly phasic taxonomy including multilocus sequence analysis (MLSA) and a genome based comparison. Both phylogenetic analyses on the basis of 16S rRNA gene sequences and MLSA based on eight protein-coding genes (gapA, gyrB, ftsZ, mreB, pyrH, recA, rpoA, and topA) showed the strain could be placed in the Rumoiensis Glade in the genus Vibrio. Sequence similarities of the 16S rRNA gene and the multilocus genes against the Rumoiensis Glade members, V. rumoiensis, V. algivorus, V. casei, and V. litoralis, were low enough to propose V. aphrogenes sp. nov. strain CA-1004(T) as a separate species. The experimental DNA-DNA hybridization data also revealed that the strain CA-1004(T) was separate from four known Rumoiensis Glade species. The G+C content of the V. aphrogenes strain was determined as 42.1% based on the genome sequence. Major traits of the strain were non motile, halophilic, fermentative, alginolytic, and gas production. A total of 27 traits (motility, growth temperature range, amylase, alginase and lipase productions, and assimilation of 19 carbon compounds) distinguished the strain from the other species in the Rumoiensis Glade. The name V. aphrogenes sp. nov. is proposed for this species in the Rumoiensis Glade, with CA-1004(T) as the type strain (JCM 31643(T) = DSM 103759(T)). |
| Rights: | http://creativecommons.org/licenses/by/4.0/ |
| Type: | article |
| URI: | http://hdl.handle.net/2115/67011 |
| Appears in Collections: | 水産科学院・水産科学研究院 (Graduate School of Fisheries Sciences / Faculty of Fisheries Sciences) > 雑誌発表論文等 (Peer-reviewed Journal Articles, etc)
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Submitter: 澤辺 智雄
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