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Genetic differences among varieties of Saccharina japonica in northern Japan as determined by AFLP and SSR analyses

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Please use this identifier to cite or link to this item:http://hdl.handle.net/2115/67318

Title: Genetic differences among varieties of Saccharina japonica in northern Japan as determined by AFLP and SSR analyses
Authors: Yotsukura, Norishige Browse this author →KAKEN DB
Maeda, Takashi Browse this author
Abe, Tsuyoshi Browse this author →KAKEN DB
Nakaoka, Masahiro Browse this author
Kawai, Tadashi Browse this author
Keywords: AFLP
Distribution region
Fragment analysis
Genetic difference
Saccharina japonica
SSR
Issue Date: Oct-2016
Publisher: Springer
Journal Title: Journal of applied phycology
Volume: 28
Issue: 5
Start Page: 3043
End Page: 3055
Publisher DOI: 10.1007/s10811-016-0807-6
Abstract: The genetic diversity of Saccharina japonica inhabiting the Hokkaido coastline and the surrounding area was investigated by AFLP and SSR analyses. A STRUCTURE analysis based on the AFLP data identified two clusters in the species, although a few local populations with genetic structures different from that of the neighboring populations were detected. The two clusters could be identified even within each current variety. In the SSR analysis, genetic variation in nucleotide sequences in all samples was located in four DNA regions (MS10, MS11, MS16, and MS29), and it is thought that these regions can be used as markers to detect individual-level variation in S. japonica. The STRUCTURE analysis of the SSR data identified four clusters in the species. Since the geographical distribution of these four different clusters does not correspond exactly to the currently recognized varieties in this species, it will be necessary to re-evaluate the distribution of the varieties of S. japonica.
Rights: The final publication is available at link.springer.com
Type: article (author version)
URI: http://hdl.handle.net/2115/67318
Appears in Collections:北方生物圏フィールド科学センター (Field Science Center for Northern Biosphere) > 雑誌発表論文等 (Peer-reviewed Journal Articles, etc)

Submitter: 四ツ倉 典滋

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